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: Yasso07 v1.0.1 forest litter decomposition, Switzerland (EM-467)
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EM Identity and Description
EM Identification (* Note that run information is shown only where run data differ from the "parent" entry shown at left)
EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
EM Short Name
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Yasso07 v1.0.1, Switzerland | * | * | * |
EM Full Name
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Yasso07 v1.0.1 forest litter decomposition, Switzerland | * | * | * |
EM Source or Collection
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None | * | * | * |
EM Source Document ID
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343 | * | * | * |
Document Author
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Didion, M., B. Frey, N. Rogiers, and E. Thurig | * | * | * |
Document Year
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2014 | * | * | * |
Document Title
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Validating tree litter decomposition in the Yasso07 carbon model | * | * | * |
Document Status
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Peer reviewed and published | * | * | * |
Comments on Status
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Published journal manuscript | * | * | * |
Software and Access (* Note that run information is shown only where run data differ from the "parent" entry shown at left)
EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
http://en.ilmatieteenlaitos.fi/yasso-download-and-support | * | * | * | |
Contact Name
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Markus Didion ?Comment:Tel.: +41 44 7392 427 |
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Contact Address
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Swiss Federal Institute for Forest, Snow and Landscape Research WSL, 8903 Birmensdorf, Switzerland | * | * | * |
Contact Email
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markus.didion@wsl.ch | * | * | * |
EM Description (* Note that run information is shown only where run data differ from the "parent" entry shown at left)
EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
Summary Description
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ABSTRACT: "...We examined the validity of the litter decomposition and soil carbon model Yasso07 in Swiss forests based on data on observed decomposition of (i) foliage and fine root litter from sites along a climatic and altitudinal gradient and (ii) of 588 dead trees from 394 plots of the Swiss National Forest Inventory. Our objectives were to (i) examine the effect of the application of three different published Yasso07 parameter sets on simulated decay rate; (ii) analyze the accuracy of Yasso07 for reproducing observed decomposition of litter and dead wood in Swiss forests;…" AUTHOR'S DESCRIPTION: "Yasso07 (Tuomi et al., 2011a, 2009) is a litter decomposition model to calculate C stocks and stock changes in mineral soil, litter and deadwood. For estimating stocks of organic C in these pools and their temporal dynamics, Yasso07 (Y07) requires information on C inputs from dead organic matter (e.g., foliage and woody material) and climate (temperature, temperature amplitude and precipitation). DOM decomposition is modelled based on the chemical composition of the C input, size of woody parts and climate (Tuomi et al., 2011 a, b, 2009). In Y07 it is assumed that DOM consists of four compound groups with specific mass loss rates. The mass flows between compounds that are either insoluble (N), soluble in ethanol (E), in water (W) or in acid (A) and to a more stable humus compartment (H), as well as the flux out of the five pools (Fig. 1, Table A.1; Liski et al., 2009) are described by a range of parameters (Tuomi et al., 2011a, 2009)." "For this study, we used the Yasso07 release 1.0.1 (cf. project homepage). The Yasso07 Fortran source code was compiled for the Windows7 operating system. The statistical software R (R Core Team, 2013) version 3.0.1 (64 bit) was used for administrating theYasso07 simulations. The decomposition of DOM was simulated with Y07 using the parameter sets P09, P11 and P12 with the purpose of identifying a parameter set that is applicable to conditions in Switzerland. In the simulations we used the value of the maximum a posteriori point estimate (cf. Tuomi et al., 2009) derived from the distribution of parameter values for each set (Table A.1). The simulations were initialized with the C mass contained in (a) one litterbag at the start of the litterbag experiment for foliage and fine root litter (Heim and Frey, 2004) and (b) individual deadwood pieces at the time of the NFI2 for deadwood. The respective mass of C was separated into the four compound groups used by Y07. The simulations were run for the time span of the observed data. The result of the simulation was an annual estimate of the remaining fraction of the initial mass, which could then be compared with observed data." | ABSTRACT: "...We examined the validity of the litter decomposition and soil carbon model Yasso07 in Swiss forests based on data on observed decomposition of (i) foliage and fine root litter from sites along a climatic and altitudinal gradient and (ii) of 588 dead trees from 394 plots of the Swiss National Forest Inventory. Our objectives were to (i) examine the effect of the application of three different published Yasso07 parameter sets on simulated decay rate; (ii) analyze the accuracy of Yasso07 for reproducing observed decomposition of litter and dead wood in Swiss forests; and (iii) evaluate the suitability of Yasso07 for regional and national scale applications in Swiss forests…" AUTHOR'S DESCRIPTION: "Yasso07 (Tuomi et al., 2011a, 2009) is a litter decomposition model to calculate C stocks and stock changes in mineral soil, litter and deadwood. For estimating stocks of organic C in these pools and their temporal dynamics, Yasso07 (Y07) requires information on C inputs from dead organic matter (e.g., foliage and woody material) and climate (temperature, temperature amplitude and precipitation). DOM decomposition is modelled based on the chemical composition of the C input, size of woody parts and climate (Tuomi et al., 2011 a, b, 2009). In Y07 it is assumed that DOM consists of four compound groups with specific mass loss rates. The mass flows between compounds that are either insoluble (N), soluble in ethanol (E), in water (W) or in acid (A) and to a more stable humus compartment (H), as well as the flux out of the five pools (Fig. 1, Table A.1; Liski et al., 2009) are described by a range of parameters (Tuomi et al., 2011a, 2009)." "At the time of this study, three parameter sets have been developed and published: (1): Tuomi et al., 2009 (henceforth P09)… The P09 parameter set was developed based on a global data set of litter mass loss measurements (Table 1 in Tuomi et al., 2009) with additional data on SOC accumulation from a soil chronosequende in southern Finland (Liski et al., 2005)." "For this study, we used the Yasso07 release 1.0.1 (cf. project homepage). The Yasso07 Fortran source code was compiled for the Windows7 operating system. The statistical software R (R Core Team, 2013) version 3.0.1 (64 bit) was used for administrating theYasso07 simulations. The decomposition of DOM was simulated with Y07 using the parameter sets P09, P11 and P12 with the purpose of identifying a parameter set that is applicable to conditions in Switzerland. In the simulations we used the value of the maximum a posteriori point estimate (cf. Tuomi et al., 2009) derived from the distribution of parameter values for each set (Table A.1). The simulations were initialized with the C mass contained in (a) one litterbag at the start of the litterbag experiment for foliage and fine root litter (Heim and Frey, 2004) and (b) individual deadwood pieces at the time of the NFI2 for deadwood. The respective mass of C was separated into the four compound gr | ABSTRACT: "...We examined the validity of the litter decomposition and soil carbon model Yasso07 in Swiss forests based on data on observed decomposition of (i) foliage and fine root litter from sites along a climatic and altitudinal gradient and (ii) of 588 dead trees from 394 plots of the Swiss National Forest Inventory. Our objectives were to (i) examine the effect of the application of three different published Yasso07 parameter sets on simulated decay rate; (ii) analyze the accuracy of Yasso07 for reproducing observed decomposition of litter and dead wood in Swiss forests;…" AUTHOR'S DESCRIPTION: "Yasso07 (Tuomi et al., 2011a, 2009) is a litter decomposition model to calculate C stocks and stock changes in mineral soil, litter and deadwood. For estimating stocks of organic C in these pools and their temporal dynamics, Yasso07 (Y07) requires information on C inputs from dead organic matter (e.g., foliage and woody material) and climate (temperature, temperature amplitude and precipitation). DOM decomposition is modelled based on the chemical composition of the C input, size of woody parts and climate (Tuomi et al., 2011 a, b, 2009). In Y07 it is assumed that DOM consists of four compound groups with specific mass loss rates. The mass flows between compounds that are either insoluble (N), soluble in ethanol (E), in water (W) or in acid (A) and to a more stable humus compartment (H), as well as the flux out of the five pools (Fig. 1, Table A.1; Liski et al., 2009) are described by a range of parameters (Tuomi et al., 2011a, 2009)." "At the time of this study, three parameter sets have been developed and published:... (2): Tuomi et al., 2011 (henceforth P11)… Tuomi et al. (2011) extended Y07 to also describe decomposition of deadwood which resulted in parameter set P11. In addition to the litter and soil data that were used for P09, Tuomi et al. (2011) employed data on mass loss of decomposing woody litter from locations in Northern Europe." "For this study, we used the Yasso07 release 1.0.1 (cf. project homepage). The Yasso07 Fortran source code was compiled for the Windows7 operating system. The statistical software R (R Core Team, 2013) version 3.0.1 (64 bit) was used for administrating theYasso07 simulations. The decomposition of DOM was simulated with Y07 using the parameter sets P09, P11 and P12 with the purpose of identifying a parameter set that is applicable to conditions in Switzerland. In the simulations we used the value of the maximum a posteriori point estimate (cf. Tuomi et al., 2009) derived from the distribution of parameter values for each set (Table A.1). The simulations were initialized with the C mass contained in (a) one litterbag at the start of the litterbag experiment for foliage and fine root litter (Heim and Frey, 2004) and (b) individual deadwood pieces at the time of the NFI2 for deadwood. The respective mass of C was separated into the four compound groups used by Y07. The simulations were run for the time | ABSTRACT: "...We examined the validity of the litter decomposition and soil carbon model Yasso07 in Swiss forests based on data on observed decomposition of (i) foliage and fine root litter from sites along a climatic and altitudinal gradient and (ii) of 588 dead trees from 394 plots of the Swiss National Forest Inventory. Our objectives were to (i) examine the effect of the application of three different published Yasso07 parameter sets on simulated decay rate; (ii) analyze the accuracy of Yasso07 for reproducing observed decomposition of litter and dead wood in Swiss forests;…" AUTHOR'S DESCRIPTION: "Yasso07 (Tuomi et al., 2011a, 2009) is a litter decomposition model to calculate C stocks and stock changes in mineral soil, litter and deadwood. For estimating stocks of organic C in these pools and their temporal dynamics, Yasso07 (Y07) requires information on C inputs from dead organic matter (e.g., foliage and woody material) and climate (temperature, temperature amplitude and precipitation). DOM decomposition is modelled based on the chemical composition of the C input, size of woody parts and climate (Tuomi et al., 2011 a, b, 2009). In Y07 it is assumed that DOM consists of four compound groups with specific mass loss rates. The mass flows between compounds that are either insoluble (N), soluble in ethanol (E), in water (W) or in acid (A) and to a more stable humus compartment (H), as well as the flux out of the five pools (Fig. 1, Table A.1; Liski et al., 2009) are described by a range of parameters (Tuomi et al., 2011a, 2009)." "At the time of this study, three parameter sets have been developed and published:... (3): Rantakari et al., 2012 (henceforth P12)… For the development of P12, Rantakari et al. (2012) obtained a subset of the previously used data which was restricted to European sites." "For this study, we used the Yasso07 release 1.0.1 (cf. project homepage). The Yasso07 Fortran source code was compiled for the Windows7 operating system. The statistical software R (R Core Team, 2013) version 3.0.1 (64 bit) was used for administrating theYasso07 simulations. The decomposition of DOM was simulated with Y07 using the parameter sets P09, P11 and P12 with the purpose of identifying a parameter set that is applicable to conditions in Switzerland. In the simulations we used the value of the maximum a posteriori point estimate (cf. Tuomi et al., 2009) derived from the distribution of parameter values for each set (Table A.1). The simulations were initialized with the C mass contained in (a) one litterbag at the start of the litterbag experiment for foliage and fine root litter (Heim and Frey, 2004) and (b) individual deadwood pieces at the time of the NFI2 for deadwood. The respective mass of C was separated into the four compound groups used by Y07. The simulations were run for the time span of the observed data. The result of the simulation was an annual estimate of the remaining fraction of the initial mass, which could then be |
Specific Policy or Decision Context Cited
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None identified | * | * | * |
Biophysical Context
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Different forest types dominated by Norway Spruce (Picea abies), European Beech (Fagus sylvatica) and Sweet Chestnut (Castanea sativa). | * | * | * |
EM Scenario Drivers
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No scenarios presented ?Comment:Yasso model simulations were run using 3 different parameter sets from: 1) Tuomi et al., 2009 (P09), 2) Tuomi et al., 2011 (P11), and 3) Rantakari et al., 2012 (P12). |
* ?Comment:The P09 parameter set (Tuomi et al., 2009) used in this Run, was developed based on a global data set of litter mass loss measurements (Table 1 in Tuomi et al., 2009) with additional data on SOC accumulation from a soil chronosequende in southern Finland (Liski et al., 2005). |
* ?Comment:Parameter set P11 (Tuomi et al. 2011) was used for this Run. |
* ?Comment:Parameter set P12 used for this Run. |
EM Relationship to Other EMs or Applications
EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
Method Only, Application of Method or Model Run
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Method + Application (multiple runs exist) ?Comment:Yasso model simulations were run using 3 different parameter sets from: 1) Tuomi et al., 2009 (P09), 2) Tuomi et al., 2011 (P11), and 3) Rantakari et al., 2012 (P12). |
Model Run Associated with a Specific EM Application ?Comment:The P09 parameter set (Tuomi et al., 2009) used in this Run, was developed based on a global data set of litter mass loss measurements (Table 1 in Tuomi et al., 2009) with additional data on SOC accumulation from a soil chronosequende in southern Finland (Liski et al., 2005). |
Model Run Associated with a Specific EM Application ?Comment:Parameter set P11 (Tuomi et al. 2011) was used for this Run. |
Model Run Associated with a Specific EM Application ?Comment:Parameter set P12 used for this Run. |
New or Pre-existing EM?
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Application of existing model | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
Related EMs (for example, other versions or derivations of this EM) described in ESML
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EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
Document ID for related EM
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Doc-342 | Doc-344 | Doc-342 | Doc-342 | Doc-342 |
EM ID for related EM
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EM-466 | EM-469 | EM-480 | EM-485 | None | None | None |
EM Modeling Approach
EM Relationship to Time (* Note that run information is shown only where run data differ from the "parent" entry shown at left)
EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
EM Temporal Extent
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1993-2013 | * | * | * |
EM Time Dependence
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time-dependent | * | * | * |
EM Time Reference (Future/Past)
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future time | * | * | * |
EM Time Continuity
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discrete | * | * | * |
EM Temporal Grain Size Value
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1 | * | * | * |
EM Temporal Grain Size Unit
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Year | * | * | * |
EM spatial extent (* Note that run information is shown only where run data differ from the "parent" entry shown at left)
EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
Bounding Type
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Geopolitical | * | * | * |
Spatial Extent Name
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Switzerland | * | * | * |
Spatial Extent Area (Magnitude)
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10,000-100,000 km^2 | * | * | * |
Spatial Distribution of Computations (* Note that run information is shown only where run data differ from the "parent" entry shown at left)
EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
EM Spatial Distribution
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spatially distributed (in at least some cases) | * | * | * |
Spatial Grain Type
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other (specify), for irregular (e.g., stream reach, lake basin) | * | * | * |
Spatial Grain Size
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5 sites | * | * | * |
EM Structure and Computation Approach (* Note that run information is shown only where run data differ from the "parent" entry shown at left)
EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
EM Computational Approach
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Numeric | * | * | * |
EM Determinism
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stochastic | * | * | * |
Statistical Estimation of EM
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* | * | * |
Model Checking Procedures Used (* Note that run information is shown only where run data differ from the "parent" entry shown at left)
EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
Model Calibration Reported?
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No | * | * | * |
Model Goodness of Fit Reported?
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No | * | * | * |
Goodness of Fit (metric| value | unit)
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None | * | * | * |
Model Operational Validation Reported?
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Yes | * | * | * |
Model Uncertainty Analysis Reported?
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No | * | * | * |
Model Sensitivity Analysis Reported?
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No | * | * | * |
Model Sensitivity Analysis Include Interactions?
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Not applicable | * | * | * |
EM Locations, Environments, Ecology
Location of EM Application (* Note that run information is shown only where run data differ from the "parent" entry shown at left)
Terrestrial location (Classification hierarchy: Continent > Country > U.S. State [United States only])
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
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Marine location (Classification hierarchy: Realm > Region > Province > Ecoregion)
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
None | * | * | * |
Centroid Lat/Long (Decimal Degree)
EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
Centroid Latitude
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46.82 | * | * | * |
Centroid Longitude
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8.23 | * | * | * |
Centroid Datum
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WGS84 | * | * | * |
Centroid Coordinates Status
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Estimated | * | * | * |
Environments and Scales Modeled (* Note that run information is shown only where run data differ from the "parent" entry shown at left)
EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
EM Environmental Sub-Class
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Forests | * | * | * |
Specific Environment Type
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forests | * | * | * |
EM Ecological Scale
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Ecological scale corresponds to the Environmental Sub-class | * | * | * |
Organisms modeled (* Note that run information is shown only where run data differ from the "parent" entry shown at left)
Scale of differentiation of organisms modeled
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EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
EM Organismal Scale
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Community | * | * | * |
Taxonomic level and name of organisms or groups identified
taxonomyHelp
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
None Available | * | * | * |
EnviroAtlas URL
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
GAP Ecological Systems, Average Annual Precipitation, Carbon storage by tree biomass (kg/m2), Carbon Storage by Tree Biomass | None Available | None Available | None Available |
EM Ecosystem Goods and Services (EGS) potentially modeled, by classification system
* Note that run information is shown only where run data differ from the "parent" entry shown at left
CICES v 4.3 - Common International Classification of Ecosystem Services (Section > Division > Group > Class)
em.detail.cicesHelp
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
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(Environmental Subclass > Ecological End-Product (EEP) > EEP Subclass > EEP Modifier)
fegs2Help
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
None | * | * | * |
EM Variable Names (and Units)
* Note that for runs, variable name is displayed only where data for that variable differed by run AND those differences were reported in the source document. Where differences occurred but were not reported, the variable is not listed. Click on variable name to view details.
Predictor
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Intermediate
EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
Intermediate (Computed) Variables (and Units)
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Response
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EM ID
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EM-467 | Parameter set P09 (Global data set plus southern Finland) | Parameter set P11 (added deadwood decomposition plus Northern Europe mass loss data) | Parameter set P12 (strictly European sites) |
Observed Response Variables (and Units)
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Computed Response Variables (and Units)
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