EcoService Models Library (ESML)
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EM-774: Diversity and distribution of floral resources influence the restoration of plant-pollinator networks on a reclaimed strip mine
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EM Identity and Description
EM-774 | |
Document Author
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Cusser, S. and K. Goodell |
Document Year
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2013 |
Variable General Info
Plant species removal algorithm ?Comment:To determine how network architecture affects network stability, we calculated the robustness of each network. Rather than describing network architecture itself, robustness quantifies a network’s ability to retain its structure following the removal, or extinction, of species (Dunne et al. 2002). We simulated extinction by removing plant species and observing which pollinators were left without forage resources. Pollinator species were considered to go “extinct” when all of their plant hosts had been removed from the network. We used the bipartite package in R to execute a removal algorithm in which plant species were removed at random without replacement. Although either plants or pollinators could have been removed in the simulation, we chose to remove plant species because in a restoration context, the presence and absence of plants is usually manipulated rather than the pollinators. Simulations were repeated 999 times for each network. We used the technique developed by Borgo et al. (2007) to quantify the robustness with a single parameter r, which ranges from 0 to 1. A network in which r approaches 0 is considered fragile, such that even if a very few plants are eliminated, most pollinators would go extinct. Likewise networks with r approaching 1 are considered robust. |
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Variable ID
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18868 |
Not reported | |
Qualitative-Quantitative
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Qualitative (Class, Rating or Ranking) |
Cardinal-Ordinal
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Non-Ordinal |
Not applicable |
Variable Typology
Plant species removal algorithm ?Comment:To determine how network architecture affects network stability, we calculated the robustness of each network. Rather than describing network architecture itself, robustness quantifies a network’s ability to retain its structure following the removal, or extinction, of species (Dunne et al. 2002). We simulated extinction by removing plant species and observing which pollinators were left without forage resources. Pollinator species were considered to go “extinct” when all of their plant hosts had been removed from the network. We used the bipartite package in R to execute a removal algorithm in which plant species were removed at random without replacement. Although either plants or pollinators could have been removed in the simulation, we chose to remove plant species because in a restoration context, the presence and absence of plants is usually manipulated rather than the pollinators. Simulations were repeated 999 times for each network. We used the technique developed by Borgo et al. (2007) to quantify the robustness with a single parameter r, which ranges from 0 to 1. A network in which r approaches 0 is considered fragile, such that even if a very few plants are eliminated, most pollinators would go extinct. Likewise networks with r approaching 1 are considered robust. |
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Predictor-Intermediate-Response
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Intermediate (Computed) Variable |
Predictor Variable Type
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Not applicable |
Response Variable Type
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Not applicable |
Data Source/Type
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Not applicable |
Variable Classification Hierarchy
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5. Ecosystem Attributes and Potential Supply of Ecosystem Goods and Services |
--Biological characteristics, processes or requirements of living ecosystem components |
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----Biological characteristics, processes or requirements of flora and fungi |
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------Species richness and biodiversity indices |
Variable Spatial Characteristics
Plant species removal algorithm ?Comment:To determine how network architecture affects network stability, we calculated the robustness of each network. Rather than describing network architecture itself, robustness quantifies a network’s ability to retain its structure following the removal, or extinction, of species (Dunne et al. 2002). We simulated extinction by removing plant species and observing which pollinators were left without forage resources. Pollinator species were considered to go “extinct” when all of their plant hosts had been removed from the network. We used the bipartite package in R to execute a removal algorithm in which plant species were removed at random without replacement. Although either plants or pollinators could have been removed in the simulation, we chose to remove plant species because in a restoration context, the presence and absence of plants is usually manipulated rather than the pollinators. Simulations were repeated 999 times for each network. We used the technique developed by Borgo et al. (2007) to quantify the robustness with a single parameter r, which ranges from 0 to 1. A network in which r approaches 0 is considered fragile, such that even if a very few plants are eliminated, most pollinators would go extinct. Likewise networks with r approaching 1 are considered robust. |
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Spatial Extent Area
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1-10 km^2 |
Spatially Distributed?
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Yes |
Observations Spatially Patterned?
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Yes |
Spatial Grain Type
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area, for pixel or radial feature |
Spatial Grain Size
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10 m radius |
Spatial Density
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Not applicable |
EnviroAtlas URL
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Variable Temporal Characteristics
Plant species removal algorithm ?Comment:To determine how network architecture affects network stability, we calculated the robustness of each network. Rather than describing network architecture itself, robustness quantifies a network’s ability to retain its structure following the removal, or extinction, of species (Dunne et al. 2002). We simulated extinction by removing plant species and observing which pollinators were left without forage resources. Pollinator species were considered to go “extinct” when all of their plant hosts had been removed from the network. We used the bipartite package in R to execute a removal algorithm in which plant species were removed at random without replacement. Although either plants or pollinators could have been removed in the simulation, we chose to remove plant species because in a restoration context, the presence and absence of plants is usually manipulated rather than the pollinators. Simulations were repeated 999 times for each network. We used the technique developed by Borgo et al. (2007) to quantify the robustness with a single parameter r, which ranges from 0 to 1. A network in which r approaches 0 is considered fragile, such that even if a very few plants are eliminated, most pollinators would go extinct. Likewise networks with r approaching 1 are considered robust. |
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Temporal Extent
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2009-2010 |
Temporally Distributed?
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Not applicable |
Regular Temporal Grain?
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Not applicable |
Temporal Grain Size Value
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Not applicable |
Temporal Grain Size Units
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Not applicable |
Temporal Density
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Not applicable |
Variable Values
Plant species removal algorithm ?Comment:To determine how network architecture affects network stability, we calculated the robustness of each network. Rather than describing network architecture itself, robustness quantifies a network’s ability to retain its structure following the removal, or extinction, of species (Dunne et al. 2002). We simulated extinction by removing plant species and observing which pollinators were left without forage resources. Pollinator species were considered to go “extinct” when all of their plant hosts had been removed from the network. We used the bipartite package in R to execute a removal algorithm in which plant species were removed at random without replacement. Although either plants or pollinators could have been removed in the simulation, we chose to remove plant species because in a restoration context, the presence and absence of plants is usually manipulated rather than the pollinators. Simulations were repeated 999 times for each network. We used the technique developed by Borgo et al. (2007) to quantify the robustness with a single parameter r, which ranges from 0 to 1. A network in which r approaches 0 is considered fragile, such that even if a very few plants are eliminated, most pollinators would go extinct. Likewise networks with r approaching 1 are considered robust. |
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Not applicable | |
Min Value
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Not applicable |
Max Value
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Not applicable |
Other Value Type
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Not applicable |
Other Value
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Not applicable |
Variable Variability and Sensitivity
Plant species removal algorithm ?Comment:To determine how network architecture affects network stability, we calculated the robustness of each network. Rather than describing network architecture itself, robustness quantifies a network’s ability to retain its structure following the removal, or extinction, of species (Dunne et al. 2002). We simulated extinction by removing plant species and observing which pollinators were left without forage resources. Pollinator species were considered to go “extinct” when all of their plant hosts had been removed from the network. We used the bipartite package in R to execute a removal algorithm in which plant species were removed at random without replacement. Although either plants or pollinators could have been removed in the simulation, we chose to remove plant species because in a restoration context, the presence and absence of plants is usually manipulated rather than the pollinators. Simulations were repeated 999 times for each network. We used the technique developed by Borgo et al. (2007) to quantify the robustness with a single parameter r, which ranges from 0 to 1. A network in which r approaches 0 is considered fragile, such that even if a very few plants are eliminated, most pollinators would go extinct. Likewise networks with r approaching 1 are considered robust. |
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Variability Expression Given?
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Not applicable |
Variability Metric
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None |
Variability Value
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None |
Variability Units
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None |
Resampling Used?
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Not applicable |
Variability Expression Used in Modeling?
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Not applicable |
Variable Operational Validation (Response Variables only)
Variable ID
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Validated?
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Validation Approach (within, between, etc.)
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Validation Quality (Qual/Quant)
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Validation Method (Stat/Deviance)
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Validation Metric
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Validation Value
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Validation Units
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Use of Measured Response Data
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